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Biomarker CD203c Full name Ectonucleotide Pyrophosphatase/Phosphodiesterase Family Member 3 Molecular Type Protein (surface antigen)
Molecular Formula / Molecular Weight / Core Functional Dimensions Diagnosis, treatment, and monitoring
Disease(or Constitution) Chronic Myeloid Leukemia(CML) Disease Subtypes /
Organ Blood, bone marrow Test Sample / Technology Platform Peripheral blood (flow cytometry)
Pathobiological Mechanisms Specifically expressed in basophils, overexpressed in CML patients, and significantly reduced after treatment.
Clinical Availability Status Research Verification: Associated with disease risk characteristics, upregulated IgE receptor cross-linking.
Notes and Dynamics The changes in the number of basophils can be evaluated during the diagnostic and treatment phases.
Biomarker miR-486-5p Full name microRNA-486-5p Molecular Type Nucleic acid (miRNA)
Molecular Formula / Molecular Weight / Core Functional Dimensions Diagnosis, prognosis, and prediction of treatment response
Disease(or Constitution) Chronic Myeloid Leukemia(CML) Disease Subtypes /
Organ Blood, bone marrow Test Sample / Technology Platform Peripheral blood leukocytes/K562 cells (qRT-PCR)
Pathobiological Mechanisms Downregulated in newly diagnosed patients, upregulated after imatinib treatment, with better prognosis and more significant therapeutic response in high-expression patients.
Clinical Availability Status Research validation: Correlated with the Sokar score, enabling early diagnosis of CML.
Notes and Dynamics Exhibits tumor-suppressive effects and regulates the downstream signaling pathway of BCR-ABL.
Biomarker MALAT1 Full name Metastasis-Associated Lung Adenocarcinoma Transcript 1 Molecular Type Nucleic acid (lncRNA)
Molecular Formula / Molecular Weight / Core Functional Dimensions Dassatinib resistance prediction
Disease(or Constitution) Chronic Myeloid Leukemia(CML) Disease Subtypes /
Organ Blood, bone marrow Test Sample / Technology Platform Patient samples (bioinformatics analysis, differential expression gene screening)
Pathobiological Mechanisms May exert tumor-suppressive effects and be associated with the development of dafatinib resistance in CML
Clinical Availability Status Research validation: Predicting their functions by constructing lncRNA-miRNA-mRNA networks.
Notes and Dynamics To provide guidance for the research on the resistance mechanism of dasatinib and the development of therapeutic targets.
Biomarker RPL13 Full name Ribosomal Protein L13 Molecular Type Protein
Molecular Formula / Molecular Weight / Core Functional Dimensions Imatinib resistance prediction
Disease(or Constitution) Chronic Myeloid Leukemia(CML) Disease Subtypes /
Organ Blood, bone marrow Test Sample / Technology Platform Plasma (ultracentrifugation, LC-MS/MS, Western blot, PRM)
Pathobiological Mechanisms Imatinib-resistant patients exhibit significantly upregulated exosomes in plasma, which are involved in protein synthesis regulation
Clinical Availability Status Research validation: Differentially expressed genes have been confirmed through multiple technical validations.
Notes and Dynamics To provide new insights into the mechanism of imatinib resistance, it serves as a potential biomarker for drug resistance.
Biomarker miR-20/miR-106/miR-222 Full name microRNA-20/microRNA-106/microRNA-222 Molecular Type Nucleic acid (miRNA)
Molecular Formula / Molecular Weight / Core Functional Dimensions Diagnosis, prognosis
Disease(or Constitution) Chronic Myeloid Leukemia(CML) Disease Subtypes /
Organ Blood, bone marrow Test Sample / Technology Platform Plasma (real-time quantitative RT-PCR)
Pathobiological Mechanisms Significantly upregulated in newly diagnosed CML patients, targeting the regulation of cell cycle, MAPK and other related pathways.
Clinical Availability Status Research verification: upregulated by 17.4-fold, 19-fold, and 74.95-fold respectively, with statistical significance.
Notes and Dynamics Provide a theoretical basis for the diagnosis and prognosis evaluation of CML.
Biomarker LDH Full name Lactate Dehydrogenase Molecular Type Protein
Molecular Formula / Molecular Weight / Core Functional Dimensions Diagnosis, prognosis, and treatment monitoring
Disease(or Constitution) Chronic Myeloid Leukemia(CML) Disease Subtypes /
Organ Blood, bone marrow Test Sample / Technology Platform Peripheral blood (GeneXpert RT-PCR, ROC curve analysis)
Pathobiological Mechanisms Strongly positively correlated with BCR-ABL transcription levels, with a significant decrease observed post-treatment
Clinical Availability Status Clinical validation: AUC of 0.881, superior to indicators such as uric acid and platelets.
Notes and Dynamics Economically viable, it can serve as an alternative diagnostic marker, prognostic biomarker, and potential therapeutic target.
Biomarker BCR-ABL (p210) fusion gene (13a2/e14a2 subtype) Full name Breakpoint Cluster Region - Abelson murine leukemia viral oncogene homolog 1 (p210) fusion gene (13a2/e14a2 subtype) Molecular Type Nucleic acid (fusion gene)
Molecular Formula / Molecular Weight / Core Functional Dimensions Diagnosis, subtype differentiation
Disease(or Constitution) Chronic Myeloid Leukemia(CML) Disease Subtypes /
Organ Blood, bone marrow Test Sample / Technology Platform Leukemic cell/patient sample (nanocluster beacon fluorescence technology)
Pathobiological Mechanisms The chromosomal translocation t(9;22) is the cause, with significant differences in clinical manifestations, treatment efficacy, and prognosis between the two subtypes.
Clinical Availability Status Technical validation: Subtype identification can be completed within 40 minutes, with detection limits of 16pM (e13a2) and 9pM (e14a2), respectively.
Notes and Dynamics Achieve high-efficiency single-tube detection to provide subtype-based evidence for precision therapy.
Biomarker Tregs/eTregs Full name Regulatory T cells/effector Regulatory T cells Molecular Type Immunocyte
Molecular Formula / Molecular Weight / Core Functional Dimensions Monitoring and prognosis of treatment-free response (TFR)
Disease(or Constitution) Chronic Myeloid Leukemia(CML) Disease Subtypes /
Organ Blood, bone marrow Test Sample / Technology Platform Clinical samples (flow cytometry)
Pathobiological Mechanisms Maintaining TFR, with a transient increase in eTregs after discontinuation followed by return to baseline, and CD8(+) T cells in an activated state.
Clinical Availability Status Research validation: Characteristic changes were observed in patients with 3-year TFR maintenance.
Notes and Dynamics As a biomarker for TFR, high concentrations of imatinib exposure may exert immunosuppressive effects.
Biomarker CIP2A Full name Cancerous Inhibitor of Protein Phosphatase 2A Molecular Type Protein
Molecular Formula / Molecular Weight / Core Functional Dimensions Prognosis, prediction of treatment failure
Disease(or Constitution) Chronic Myeloid Leukemia(CML) Disease Subtypes /
Organ Blood, bone marrow Test Sample / Technology Platform Diagnostic sample (protein level detection)
Pathobiological Mechanisms Overexpression is associated with disease progression and treatment failure, with this effect observed only in patients treated with dasatinib.
Clinical Availability Status Research validation: Clinical trials have confirmed its association with progression-free survival and treatment failure rate.
Notes and Dynamics It can serve as a simple and feasible diagnostic biomarker, providing a reference for the formulation of therapeutic strategies.
Biomarker Anti-RoSSA antibody Full name Anti-Ro/SSA antibody (Ro52/Tripartite Motif Containing 21, Ro60/SSA) Molecular Type Protein (autoantibody)
Molecular Formula / Molecular Weight / Core Functional Dimensions Diagnosis, disease association
Disease(or Constitution) Autoimmune Disease (AD) Disease Subtypes pSS
Organ Spleen, thymus, lymphoid tissue Test Sample / Technology Platform Serum (immunological assay)
Pathobiological Mechanisms Participates in immune regulation; target of autoimmune response in salivary glands.
Clinical Availability Status Clinically available; positive rate reaches 60%-80% in pSS cases, sensitivity of 75%-85% for early screening, and specificity >88%.
Notes and Dynamics Core serological marker; associated with extraglandular manifestations.
Biomarker Anti-La/SSB antibodies Full name Anti-La/SSB antibodies Molecular Type Protein (autoantibody)
Molecular Formula / Molecular Weight / Core Functional Dimensions Diagnosis, disease association
Disease(or Constitution) Autoimmune Disease (AD) Disease Subtypes pSS
Organ Spleen, thymus, lymphoid tissue Test Sample / Technology Platform Serum (immunological assay)
Pathobiological Mechanisms Participates in immune regulation and RNA metabolism.
Clinical Availability Status Clinically available; in pSS patients, positive rate is 30%-60%, with specificity >90% for differentiating from other autoimmune diseases..
Notes and Dynamics Often co-occurs with Anti-Ro/SSA; aids in diagnosis.
Biomarker LA Full name Lupus Anticoagulant Molecular Type Protein (abnormal antibody function)
Molecular Formula / Molecular Weight / Core Functional Dimensions Diagnosis, thrombosis risk assessment
Disease(or Constitution) Autoimmune Disease (AD) Disease Subtypes APS
Organ Spleen, thymus, lymphoid tissue Test Sample / Technology Platform Serum (APTT corrected test, RVVT, etc.)
Pathobiological Mechanisms Prolonged clotting time, detected by functional tests
Clinical Availability Status Clinically available: Strongly associated with thrombosis.
Notes and Dynamics It exhibits a higher positivity rate in patients with venous thrombosis, serving as a critical thrombotic risk indicator.
Biomarker anti-β2-GPⅠ antibodies Full name Anti-beta-2-Glycoprotein Ⅰ antibodies Molecular Type Protein (autoantibody)
Molecular Formula / Molecular Weight / Core Functional Dimensions Diagnosis, thrombosis risk assessment
Disease(or Constitution) Autoimmune Disease (AD) Disease Subtypes APS
Organ Spleen, thymus, lymphoid tissue Test Sample / Technology Platform Serum (ELISA)
Pathobiological Mechanisms The target antigen is β2-glycoprotein I, which participates in coagulation/anticoagulation regulation.
Clinical Availability Status Clinically available: higher specificity than aCL.
Notes and Dynamics It has significant supplementary diagnostic value for aCL-negative suspected APS patients.
Biomarker aCL Full name Anti-Cardiolipin Antibodies Molecular Type Protein (autoantibody)
Molecular Formula / Molecular Weight / Core Functional Dimensions Diagnosis, Thrombosis/acute pregnancy risk assessment
Disease(or Constitution) Autoimmune Disease (AD) Disease Subtypes APS
Organ Spleen, thymus, lymphoid tissue Test Sample / Technology Platform Serum (ELISA)
Pathobiological Mechanisms The target antigen is cardiolipin, with subtypes including IgG, IgM, and IgA.
Clinical Availability Status Clinically available: Persistent positivity at medium to high titers is a critical diagnostic criterion for APS.
Notes and Dynamics IgG subtypes show strongest association with thrombosis and adverse pregnancy outcomes.
Biomarker SHP2 Full name Src Homology 2 Domain-Containing Protein Tyrosine Phosphatase 2 Molecular Type Protein
Molecular Formula / Molecular Weight / Core Functional Dimensions Diagnosis and pathogenesis-related
Disease(or Constitution) Autoimmune Disease (AD) Disease Subtypes SLE
Organ Spleen, thymus, lymphoid tissue Test Sample / Technology Platform Plasma (ELISA)
Pathobiological Mechanisms Elevated plasma levels, associated with clinical laboratory features, promote lupus progression。
Clinical Availability Status Research verification: Inhibitors can improve tissue damage and immune dysfunction in lupus mice
Notes and Dynamics Closely associated with the pathogenesis of SLE, it also holds potential as a diagnostic and therapeutic target.
Biomarker Sema5A Full name Semaphorin 5A Molecular Type Protein
Molecular Formula / Molecular Weight / Core Functional Dimensions Pathogenesis-related, therapeutic targets
Disease(or Constitution) Autoimmune Disease (AD) Disease Subtypes SLE
Organ Spleen, thymus, lymphoid tissue Test Sample / Technology Platform Serum and peripheral blood mononuclear cells (ELISA, qRT-PCR, Western Blot)
Pathobiological Mechanisms Elevated serum levels promote Th17 differentiation through the Sema5A-PlexinA1 axis and the PI3K-Akt-mTOR pathway.
Clinical Availability Status Research validation: Positively correlated with SLEDAI, lupus nephritis, and IL-17A levels.
Notes and Dynamics A novel therapeutic target for SLE, which also reflects immune dysregulation.

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This study was supported by the Scientific Research Innovation Capability Support Project for Young Faculty (SRICSPYF-ZY2025112), the Fundamental and Interdisciplinary Disciplines Breakthrough Plan of the Ministry of Education of China (JYB2025XDXM612)

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